Bioinformatics
Sampled offers bioinformatics analysis and custom reporting services, tailoring sequencing and microarray data analysis to individual client needs for seamless integration and maximum research insights.
What Are Sampled’s Bioinformatics Services?
Sampled offers expert-level bioinformatics analysis and custom bioinformatics reporting to suit our client’s needs.
Bioinformatics Analysis
To perform precise bioinformatics analyses, expertise across an evolving skill set is essential. Sampled’s team of experts excels in delivering top-tier bioinformatics analyses, handling vast datasets, and extracting crucial insights. Our team of bioinformaticians can handle any dataset from any analysis pipeline we offer here at Sampled, leaving you free to plan the next step of your project.
Sampled obtains data from its in-house analytics pipeline or directly from clients. The data is securely stored on the laboratory information management system (LIMS) and can be accessed through SampledSphere. Sampled offer extensive data storage, ensuring clients are not burdened by storage limitations. Tailored data analysis meets client-specific requirements, which can vary based on sequencing or array types. For analysis, we integrate cloud services like Illumina BaseSpace, DNAnexus, and our in-house analysis pipeline to ensure clients are getting the most from their data. Sampled’s expert team is capable of meeting diverse analysis needs efficiently.
Bioinformatics Custom Reporting
Custom reporting is an integral part of our bioinformatics services at Sampled. We understand that the applications of bioinformatics are vast, and reporting output needs to be as diverse as the analyses themselves. Our reports are tailored precisely to our clients’ needs, regardless of the application or stage of analysis. SampledSphere, our client-facing portal, ensures that raw data is seamlessly transformed to match the client’s format requirements. This streamlines the integration between our analysis and the client’s systems and reduces the need for data cleansing or reformatting on the client’s side. This emphasis on custom reporting allows our clients to obtain the most valuable insights from their research data in a format of their choice.
Sampled’s bioinformatics custom reporting service is straightforward. Clients can specify the desired data format, and Sampled’s team will precisely structure the data accordingly. In cases where clients are uncertain about data presentation, Sampled’s experts offer guidance to ensure the data is delivered in an easily interpretable format. Sampled offers customizable data output for various analysis levels. For example, next-generation genome sequencing data analysis can be categorized into four tiers, ranging from providing raw sequencing data and quality control (tier one) to meeting specific client requirements, such as assessing variant impacts in clinical trials (tier four). Data from all analysis levels is promptly accessible to clients. Sampled adheres to client specifications for data export, including file type, format, and labeling. Data is tailored to match the client’s platform and security requirements and can be directly uploaded to their portal, if available. A manifest is provided to clarify data content and storage locations, ensuring ease of access.
Why Use Sampled’s Bioinformatics Services?
Expertise
Sampled’s team of bioinformaticians boasts extensive experience with various analysis and data types while helping you choose the best formatting and interface for your needs.
Streamlined Workflow
Sampled’s validated bioinformatics platform seamlessly integrates into our analytical workflow, enabling close collaboration between bioinformatics experts and the scientists who conducted the sequencing and sample extraction. This streamlined approach minimizes troubleshooting and enhances efficiency.
World-leading Partners
Sampled is partnered with industry leaders to provide top-of-the-range sequencing technologies like Illumina NovaSeq, PacBio Revio, and 10X Genomics. We also integrate cloud services to maximize data insights.
Tailored Analysis
We collaborate closely with clients to tailor analyses to their exact specifications, ensuring that they perform the appropriate analysis to answer their research questions. We constantly expand our services to simplify clients’ lives and can analyze data generated outside Sampled.
Fully Customized Output
Analyzing and interpreting sequencing and microarray data can be challenging, especially when data formats are not easily manageable. Sampled offers fully customizable bioinformatics reporting tailored to each client’s specific needs. This means you can skip the hassle of reformatting data and dive into analysis or present preliminary results promptly.
Security
Data security remains our paramount concern. We ensure data encryption during transfer, offering secure access via SampledSphere, compliant with Title 21 CFR part 11 and HIPAA. Your data is safeguarded and accessible only to authenticated individuals, with absolute client data ownership and no third-party distribution or sale.
Bioinformatics Applications
We work with a wide range of clients, including academic laboratories, biopharmaceutical companies, and government agencies. As such, the applications for our bioinformatics services are practically endless.
- Disease identification
- Diagnostics
- Drug discovery
- Pharmacogenomics
- Clinical trials
- Research studies
- Biomarker discovery
- Population health studies
- Novel genome assembly
- Agrigenomics
- Disease modeling
- Development modeling
What Are the Input Requirements for Bioinformatics Services?
Bioinformatics is central to our analytical pipeline here at Sampled, and the data we analyze is derived from a wide variety of datasets generated in-house by our expert teams. We also accept raw sequencing data from our clients that has been generated elsewhere.
Find out more about Sampled’s bioinformatics services
Interested in outsourcing your bioinformatics needs to a team of experts? Get in touch with Sampled today to discover how we can solve all of your bioinformatics needs.
